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Species belonging to selected taxon:

Taraxacum officinale



ABOUT THIS RECORD

ID: MNEST002704
species: Taraxacum officinale
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATTTTGGGACGGAGGGAGT

miRNA*
ATCAATCGTCACAACATGAGA

mismatches: 5
bulges: 1

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pre-miRNA
ATGGACTATCATTTTGGGACGGAGGGAGTATGAAATTTGTTTCCATTGTTGCAGGAGGTTATATCTGAAACCCACATAGTCCTCAACACCCTTTTTAGGT
TTCCATGAATCAATCGTCACAACATGAGAGAGAA


dot-bracket secondary structure
.....((.((((.(((.(((((...((.(((((((((((.......(((((.((((((((........)))).......))))))))).......)))))
)).))))..))..))))).))).)))).))....



SIMILARITIES
miRBase tae-MIR1122: 0.0001

PMRD osa-miRf10743-akr: 0.000007

microPC miR1439: 0.0001
UniProt no hits

RFAM MIR1122: 0.00003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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